Qualitative agro-morphological character diversity of similar or duplicate named rice (Oryza sativa L.) germplasm of Bangladesh

Paper Details

Research Paper 01/10/2015
Views (454) Download (12)
current_issue_feature_image
publication_file

Qualitative agro-morphological character diversity of similar or duplicate named rice (Oryza sativa L.) germplasm of Bangladesh

Mir Sharf Uddin Ahmed, Mohammed Khalequzzaman, Md. Khairul Bashar, A.K.M. Shamsuddin
J. Bio. Env. Sci.7( 4), 51-61, October 2015.
Certificate: JBES 2015 [Generate Certificate]

Abstract

Twenty-one similar or duplicate named Kartiksail rice of Bangladesh were studied for 21 qualitative agro-morphological characters at BRRI during T. Aman 2009-11 seasons. Only the presence and shape of ligule showed no variation. The genotypes showed strong surface pubescence on penultimate leaf blade (57%), erect type flag leaf (81%) and lateral tiller (71%), no anthocyanin color in nodes (86%) straw color of apiculus (76%) and awnless (81%) grain and late and slow type leaf senescence (71%), respectively. Again, four types of leaf blade (pale green, green, purple tip and purple margin), five types of lemma and palea (yellowish to straw, gold and or gold furrows on straw, brown spots/furrows on straw, brown and light purple on straw) and four types of apiculus (straw, gold, brown and purple) were observed among the germplasm. The studied germplasm also showed features for developing varieties with unique identification like KS14 had purple (medium) color in basal leaf sheath, KS5 had purple tip and KS14 had purple margin leaf blade, KS5 and KS6 had purple stigma and apiculus, KS5 had brown (tawny) lemma and palea. Besides, many germplasm had strong hairs on leaf blade surface for developing tolerant varieties against leaf surface infestations. Besides, the genotypes including BR4 and BR23 were grouped into two clusters by the UPGMA clustering method, where cluster II had the maximum genotypes (20). It revealed that accession no 438 and 539 were duplicated. Finally, the Kartiksail land races though having similar or duplicate names showed unique variability for safe conservation.

VIEWS 27

Adair CR, Beachell HM, Jodon NE, Johnston TH, Thysell JR, Green VE, Webb BD, Atkins JG. 1966. Rice breeding and testing methods in the United States. In: Rice in the United States: varieties and production. USDA Agr. Handbook 289, 19.

Aggarwal RK, Shenoy VV, Ramadevi J, Rajkumar R, Singh L. 2002. Molecular characterization of some Indian Basmati and other elite rice genotypes using fluorescent-AFLP. Theoretical and Applied Genetics 105(5), 680-690. http://dx.doi.org/10.1007/s00122-002-0973-6.

Ahmed MS, Khaleda A, Khalequzzaman M, Rashid ESMH, Bashar MK. 2010. Diversity analysis in Boro rice (Oryza sativa L.) accessions. Bangladesh Journal of Agricultural Research 35(1), 29-36.

Bisne R, Sarawgi AK. 2008. Agro-morphological and quality characterization of Badshah Bhog group from aromatic rice germplasm of Chhattisgarh. Bangladesh Journal of Agricultural Research 33, 479-492. http://dx.doi.org/10.3329/bjar.v33i3.1607.

Brondani C, Borba TCO, Rangel PHN, Brondani  RPV.  2006.  Determination  of  genetic variability  of  traditional  varieties  of  Brazilian  rice using microsatellite markers. Genetics and Molecular Biology 29(4), 676-684. http://dx.doi.org/10.1590/s141547572006000400017.

Emani C, Jiang Y, Miro B, Hall TC, Kohali A. 2008. Transgenic cereals and forage grasses. Compendium of transgenic crop plants 1, 1-234. http://dx.doi.org/10.1002/9781405181099.k0101.

FAO. 2004. Food and Agriculture Organization of the United Nations, The state of Food and Agriculture 2003-2004. Agricultural Biotechnology: Meeting the Needs of the Poor? FAO, Rome, Italy. http://dx.doi.org/10.1111/j.0169-5150.2005.t01-7-00008.x.

Ford-Lloyd  BV,  Jackson  MT,  Newbury  HJ. 1997. Molecular markers and the management of genetic resources in seed Genbanks: a case study of rice. In: Callow JA, Ford-Lloyd BV, Newbury HJ, Eds. Biotechnology and Plant Genetic Resources. Walligford, UK: CAB International, 103-118 p.

Frankel OH, Soule ME. 1981. Conservation and Evolution.  New  York,  USA:  Cambridge  University Press. http://dx.doi.org/10.1017/s0030605300017853.

Fukuoka S, Suu TD, Ebanna K, Trinh LN. 2006. Diversity in phenotypic profiles in landraces populations of Vietnamese rice: a case study of agronomic characters for conserving crop genetic diversity on farm. Genetic Resources and Crop Evolution 53, 753-761.

Hamid A, Nasiruddin M, Haque M, Haque E. 1982. Deshi Dhaner Jat (Local rice varities). In: Taluckdar MHR, Ed. Joydevpur, Gazipur, Bangladesh: Bangladesh Rice Research Institute, p. ix-x.

Hossain M, Jaim WMH, Alam MS, Rahman ANMM. 2013. Rice biodiversity in Bangladesh: adoption, diffusion and disappearance of varieties. In: A Statistical Report from Farm Survey in 2005. Research and Evaluation Division, BRAC Centre, Dhaka, Bangladesh: BRAC.

Hossain MZ. 2008. Genetic diversity study in fine grain and aromatic landraces of rice (Oryza sativa L.) by morpho-physico-chemical characters and micro-satellite DNA markers, PhD thesis, Department of Genetics and Plant Breeding, BSMRU, Gazipur, Bangladesh.

Jayamani P, Negrao S, Martins M, Macas B, Oliveira MM. 2007. Genetic relatedness of Portuguese  rice  accessions  from  diverse  origins  as assessed by microsatellite markers. Crop Science 47(2), 879-86. http://dx.doi.org/10.2135/cropsci2006.04.0236.

Laxuman C, Salimath P, Varma M. 2011. Molecular mapping and tagging of quantitative trait loci in rice-molecular breeding in rice. Germany: Lambert Academic Publishing GmbH & Co.

Liu K, Muse SV. 2005. Power Marker: Integrated analysis environment for genetic marker data. Bioinformatics 21, 2128-29. http://dx.doi.org/10.1093/bioinformatics/bti282.

Maclean JL, Dawe DC, Hardy B, Hettel GP. 2002. Rice Almanac: source book for the most important economic activity on Earth. 3rd edn. Wallingford, UK: CAB International.

Mahalingam A, Saraswathi R, Ramalingam J, Jayaraj T. 2012. Genetic studies on divergence and phenotypic characterization of indigenous and exotic indica  germplasm  lines  in  rice  (Oryza  sativa  L.). African Journal of Agricultural Research 7(20), 3120-28. http://dx.doi.org/10.5897/ajar11.002.

Nascimento WF, Silva EF, Veasey EA. 2011. Agro-morphological characterization of upland rice accessions. Scientific Agriculture (Piracicaba, Braz.) 68(6), 652-60.

Parikh M, Motiramani NK, Rastogi NK, Sharma B. 2012. Agro-morphological characterization and assessment of variability in aromatic rice germplasm. Bangladesh Journal of Agricultural Research 37(1), 1-8.

Rahman  L,  Rahman  MS,  Sohag  MKH,  Mia MM. 2009. Plant varieties of Bangladesh: Morphological and molecular characterization, Vol. 3. Ministry of Agriculture, Government of the People’s Republic of Bangladesh, Secretariat, Dhaka: Seed Wing, 392 p.

Rohlf F. 2002. NTSYS-pc: Numerical taxonomy and multivariate analysis system. 2.2 edn. Stony Brook, USA: Department of Ecology and Evolution, State University of NY.

Sarma, MK, Richharia AK, Agrawal PK. 2003. Pattern of pigmentation in Ahu Rices of Assam. Indian Journal of Plant Genetic Resource 16, 35-39.

Sneath PH, Sokal PH. 1973. Numerical taxonomy: The Principles and Practice of Numerical Classification. Sanfrancisco, USA: Freeman WH and Company.

Subba Rao LV, Shiva Prasad G, Chiranjivi M, Chaitanya U, Surendhar R. 2013. DUS characterization for farmer varieties of rice. OSR Journal of Agriculture and Veterinary Science 4(5), 35-43. http://dx.doi.org/10.9790/2380-0453543.

Teklu Y, Hammer K, Huang X, Roder M. 2006. Analysis of microsatellite diversity in Ethiopian durum wheat landraces, Genetic Resources and Crop Evolution 53, 1115-1126. http://dx.doi.org/10.1007/s10722-005-1146-7.

Thomson MJ, Septiningsih EM, Suwardjo F, Santoso TS, Silitonga TS, McCouch SR. 2007. Genetic diversity analysis of traditional and improved Indonesian rice (Oryza sativa L.) germplasm using microsatellite markers. Theoretical and Applied Genetics 114(3), 559-568.

Yadav S, Singh A, Singh MR, Goel N, Vinod KK, Mohapatra T, Singh AK. 2013. Assessment of genetic  diversity  in  Indian  rice  germplasm  (Oryza sativa L.): use of random versus trait-linked microsatellite markers. Journal of Genetics 92(3), 545-57. http://dx.doi.org/10.1007/s12041-013-0312-5.