Cloning and sequence analysis of GbCHS6 gene from Ginkgo biloba

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Research Paper 04/04/2025
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Cloning and sequence analysis of GbCHS6 gene from Ginkgo biloba

Hualin Zou, Weiwei Zhang
Int. J. Biosci. 26(4), 79-86, April 2025.
Copyright Statement: Copyright 2025; The Author(s).
License: CC BY-NC 4.0

Abstract

Chalcone synthase (CHS) is a key enzyme in the flavonoids biosynthetic pathway. In this study, chalcone synthase gene from Ginkgo biloba (GbCHS6) was cloned. The cDNA fragment of GbCHS6 was 1191 bp, which encodes 396-amino-acid proteins with a calculated molecular weight of 43.29 kDa and isoelectric point of 6.47. Multiple alignments showed the amino acid sequence of GbCHS6 have extensive homology with those of CHS proteins from other plant. Phylogenetic tree analysis revealed that GbCHS6 had closer relationship with CHSs from Pinaceae and Cupressaceae plants than other plants. Molecular cloning and sequence analysis of GbCHS6 were conducted to further investigate the molecular mechanisms of biosynthese of flavonoids.

De Marco A. 2025. Recent advances in recombinant production of soluble proteins in E. coli. Microbial cell factories 24(1), 1-12. https://doi.org/10.1186/s12934-025-02646-8

Gong W, Chen C, Dobeš C, Fu C, Koch MA. 2008. Phylogeography of a living fossil: pleistocene glaciations forced Ginkgo biloba L. (Ginkgoaceae) into two refuge areas in China with limited subsequent postglacial expansion. Molecular phylogenetics and evolution 48(3), 1094-1105. https://doi.org/10.1016/j.ympev.2008.05.003

Gomes D, Rodrigues JL, Rodrigues LR. 2024. Step-by-step optimization of a heterologous pathway for de novo naringenin production in Escherichia coli. Applied Microbiology and Biotechnology 108(1), 435. https://doi.org/10.1007/s00253-024-13271-7

Huang J, Zhao X, Zhang Y, Chen Y, Zhang X, Yi Y, Ju Z, Sun W. 2024. Chalcone-synthase-encoding RdCHS1 is involved in flavonoid biosynthesis in Rhododendron delavayi. Molecules 29(8), 1822. https://doi.org/10.3390/molecules29081822

Jiang R, Yuan S, Zhou Y, Wei Y, Li F, Wang M, Chen B, Yu H. 2024. Strategies to overcome the challenges of low or no expression of heterologous proteins in Escherichia coli. Biotechnology advances 75, 108417. https://doi.org/10.1016/j.biotechadv.2024.108417

Jia YH, He F, Shen ZL, Xie XH, Lv SJ, Jiang BX, Yang GX, Yan YC, Wang DD, Li P, Chen QY, Chen XY, Yan ZW, Wang MY, Mao YB. 2021. Differential contributions of MYCs to insect defense reveals flavonoids alleviating growth inhibition caused by wounding in Arabidopsis. Frontiers in plant science 12, 700555. https://doi.org/10.3389/fpls.2021.700555

Mahajan V, Chouhan R, Jamwal VL, Kapoor N, Gandhi SG. 2023. A wound inducible chalcone synthase gene from Dysoxylum gotadhora (DbCHS) regulates flavonoid biosynthesis. Physiology and Molecular Biology of Plants 29(7), 959-969. https://doi.org/10.1007/s12298-023-01344-2

Piazza S, Pacchetti B, Fumagalli M, Bonacina F, Dell’Agli M, Sangiovanni E. 2019. Comparison of two Ginkgo biloba L. extracts on oxidative stress and inflammation markers in human endothelial cells. Mediators of inflammation 1, 6173893. https://doi.org/10.1155/2019/6173893

Tang X, Ren C, Hu J, Chen J, Wang J, Wang R, Wu Q, Liao W, Pei J. 2023. Cloning, expression and activity analysises of chalcone synthase genes in Carthamus tinctorius. Chinese herbal medicines 15(2), 291-297. https://doi.org/10.1016/j.chmed.2022.12.005

Tohge T, de Souza LP, Fernie AR. 2017. Current understanding of the pathways of flavonoid biosynthesis in model and crop plants. Journal of experimental botany 68(15), 4013-4028. https://doi.org/10.1093/jxb/erx177

Weinmann S, Roll S, Schwarzbach CJ, Vauth C, Willich SN. 2010. Effects of Ginkgo biloba in dementia: systematic review and meta-analysis. BMC Geriatrics 10, 1-12. https://doi.org/10.1186/1471-2318-10-14

Wang Z, Yu Q, Shen W, El Mohtar CA, Zhao X, Gmitter FG. 2018. Functional study of CHS gene family members in citrus revealed a novel CHS gene affecting the production of flavonoids. BMC plant biology 18(1), 1-13. https://doi.org/10.1186/s12870-018-1418-y

Wu Z, Wu Y. 2023. Molecular characterization of a chalcone synthase gene RhCHS from Rhododendron × hybridum Hort. Gene 857, 147176. https://doi.org/10.1016/j.gene.2023.147176

Xu F, Cheng SY, Cheng SH, Wang Y, Du HW. 2007. Time course of expression of chalcone synthase gene in Ginkgo biloba. Journal of plant physiology and molecular biology 33(4), 309-317.

Liu Z, Cheng S, Liu XQ, Kuča K, Hashem A, Al-Arjani AF, Almutairi KF, Abd Allah EF, Wu QS, Zou YN. 2022. Cloning of a CHS gene of Poncirus trifoliata and its expression in response to soil water deficit and arbuscular mycorrhizal fungi. Frontiers in plant science 13, 1101212. https://doi.org/10.3389/fpls.2022.1101212

Zhang Q, Li T, Gao M, Ye M, Lin M, Wu D, Guo J, Guan W, Wang J, Yang K, Zhu L, Cheng Y, Du B, He G. 2022. Transcriptome and metabolome profiling reveal the resistance mechanisms of rice against brown planthopper. International journal of molecular sciences 23(8), 4083. https://doi.org/10.3390/ijms23084083

Zhang Z, Qu P, Hao S, Li R, Zhang Y, Zhao Q, Wen P, Cheng C. 2023. Characterization and functional analysis of chalcone synthase genes in Highbush Blueberry (Vaccinium corymbosum). International journal of molecular sciences 24(18), 13882. https://doi.org/10.3390/ijms241813882

Zhou L, Meng Q, Qian T, Yang Z. 2010. Ginkgo biloba extract enhances glucose tolerance in hyperinsulinism-induced hepatic cells. Journal of Natural Medicines 65, 50-56. https://doi.org/10.1007/s11418-010-0456-z

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