In Silico molecular docking evaluation of mangiferin against key colorectal cancer associated proteins

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Research Paper 05/03/2026
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In Silico molecular docking evaluation of mangiferin against key colorectal cancer associated proteins

Monisha Ravi, A. Malarvizhi*
Int. J. Biosci. 28(3), 22-32, March 2026.
Copyright Statement: Copyright 2026; The Author(s).
License: CC BY-NC 4.0

Abstract

Colorectal cancer (CRC) is a multifactorial malignancy driven by dysregulated inflammatory signaling, aberrant cell proliferation, defective apoptosis, loss of tumor suppressor functions, and aberrant activation of oncogenic signaling pathways. The identification of multi-target agents capable of simultaneously modulating these interconnected pathways represents a promising therapeutic strategy. In the present study, the multi-target therapeutic potential of mangiferin, a bioactive C-glucosyl xanthone, was systematically evaluated against key CRC-associated molecular targets using structure-based molecular docking. Molecular docking was performed using AutoDock Vina against proteins involved in inflammation (TNF-α and COX-2), proliferation and angiogenesis (K-Ras, BRAF, β-catenin, VEGFR-2, and Cyclin D1), apoptosis (Bcl-2, BAX, and Caspase-3), tumor suppression (p53 and APC), and the PI3K/Akt/mTOR signaling pathway (PI3K-α, AKT, and mTOR). Protein structures were retrieved from the RCSB Protein Data Bank and docked following binding-site prediction using CASTp. Mangiferin exhibited strong to moderate binding affinities toward all selected targets, with docking scores ranging from −10.5 to −7.0 kcal/mol. The strongest binding affinity was observed with TNF-α (−10.5 kcal/mol), followed by AKT (−10.3 kcal/mol), COX-2 (−9.8 kcal/mol), BRAF (−9.4 kcal/mol), and PI3K-α (−9.4 kcal/mol), indicating effective targeting of inflammatory mediators and oncogenic survival signaling pathways. Moderate binding affinities were observed for VEGFR-2 and p53 (−8.5 kcal/mol), K-Ras and APC (−8.4 kcal/mol), and Bcl-2 (−8.2 kcal/mol), suggesting potential inhibition of angiogenesis, cell proliferation, and anti-apoptotic signaling. Additionally, mangiferin demonstrated favorable interactions with β-catenin (−7.7 kcal/mol), caspase-3 (−7.6 kcal/mol), mTOR (−7.5 kcal/mol), BAX (−7.1 kcal/mol), and Cyclin D1 (−7.0 kcal/mol), highlighting its capacity to modulate Wnt signaling, apoptosis, cell-cycle regulation, and PI3K/AKT/mTOR pathway components. Overall, mangiferin–protein complexes were stabilized through a combination of hydrogen bonding and hydrophobic π-interactions, supporting mangiferin as a promising multi-target phytochemical with therapeutic relevance in colorectal cancer.

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