Morphological, biochemical and molecular characterization of Xanthomonas campestris pv. vesicatoria of African nightshades (Solanum scabrum Mill.)

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Research Paper 01/07/2017
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Morphological, biochemical and molecular characterization of Xanthomonas campestris pv. vesicatoria of African nightshades (Solanum scabrum Mill.)

William Omuketi Emitaro, David Mutisya Musyimi, Darius Andika Otiato, Benson Onyango
Int. J. Biosci.11( 1), 190-197, July 2017.
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Abstract

African nightshade (Solanum scabrum Mill.) is one important vegetable in terms of food security and nutritional balance. The vegetable is usually medicinal and also a source of income to many small scale farmers in Kenya. Productivity of this vegetable is affected by several factors including low soil fertility and bacterial leaf spot disease caused by Xanthomonas campestris pv. vesicatoria which reduces yield by up to 40-70%. Little information is available regarding diseases caused by Xanthomonas campestris pv. vesicatoria in African nightshades. The aim of the study was to Characterize Xanthomonas campestris pv. vesicatoria from infected African nightshades. Six isolates from diseased leaves were morphologically, biochemically and molecular genetically characterized. All the isolates produced yellow colonies on modified Tween B Media (mTBM) and Yeast Dextrose Calcium carbonate (YDC) media, were rod shaped, obligately aerobic, gram negative, catalase positive, Oxidase negative and produced hydrogen sulphide gas. On the phylogenetic tree, the isolates were 100% related to Xanthomonas campestris from NCB sequence database hence identified as Xanthomonas campestris one of the species produced when Xanthomonas campestris pv. vesicatoria strains were reclassified.

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AL-Saleh MA. 2011. “Pathogenic Variability among Five Bacterial Isolates of Xanthomonas campestris pv. vesicatoria, Causing Spot Disease on Tomato and their Response to Salicylic Acid.” Journal of the Saudi Society of Agricultural Sciences 10(1), 47-51.

Araújo ER, Costa JR, Ferreira MASV, Quezado-Duval AM. 2012. “Simultaneous Detection and Identification of the Xanthomonas Species Complex Associated with Tomato Bacterial Spot Using Species-Specific Primers and Multiplex PCR.” Journal of Applied Microbiology 113(6), 1479-90.

Ashilenje DS, Omunyin ME, Okalebo JR. 2012. “Potassium Nutrition: Towards Sustainable and Profitable Production of Vegetable African Nightshades (Solanum L. Section Solanum) in Western Kenya.” Journal of Chemical and Pharmaceutical Research 4(4), 2306-11.

Assaha DVM, Ueda A, Saneoka H. 2013. Comparison Of Growth and Mineral Accumulation of two Solanaceous Species, Solanum scabrum Mill. (Huckleberry) And S. melongena L. (Eggplant), Under Salinity Stress, Soil Science and Plant Nutrition 59(6), 912-920.

Edmonds JM, Chweya JA. 1997. Promoting the conservation and use of under-utilized and neglected crops: Black nightshades (Solanum nigrum L.) and related species. International Plant Genetic Resources Institute, Rome, Italy pp. 1-90.

Gracelin, D. H. S., John A.D. E.B., Benjamin P.J., and Rathna K. 2012. Detection and Identification of Xanthomonas campestris pv. Centellae on Leaves of Centella asiatica Collected in Tamilnadu. Asian Journal of Pharmaceutical and Clinical Research 5(3), 2011-13.

Gupta SK, Sheikh MA, Islam MS, Rahman KS, Jahan N, Rahman MM, Hoekstra RM, Johnston R, Ram PK, Luby S. 2007. Usefulness of the hydrogen sulfide test for assessment of water quality in Bangladesh Journal of Applied Microbiology 104, 388-395.

Kebede M, Amare A, Mohammed Y. 2013. Efficacy of Plant Extracts , Traditional Materials and Antibacterial Chemicals against Xanthomonas campestris pv . vesicatoria on Tomato Seed.” African Journal of Microbiology Research 7(20), 2395-2400.

Lee PY, Costumbrado J, Hsu CY, Kim YH. 2012. Agarose Gel Electrophoresis for the Separation of DNA Fragments. Journal of Visualised Experiments (62), 1-5.

Lee Y, Sung A, Liu T, Lee Y. 2009. Combination of Chromomeric Differential Medium and est A-Specific PCR for Isolation and Detection of Phytopathogenic Xanthomonas spp. Applied and Environmental Microbiology 75(21), 6831-683.

Lue YS, Deng WL, Wu YF, Cheng AS, Hsu ST, Tzeng KC. 2010. Characterization of Xanthomonas Associated with Bacterial Spot of Tomato and Pepper in Taiwan. Plant Pathology Bulletin 19, 181-190.

Mbega ER, Mortensen CN, Mabagala RB, Wulff EG. 2012.The Effect Of Plant Extracts As Seed Treatments To Control Bacterial Leaf Spot Of Tomato In Tanzania Journal of General Plant Pathology 78, 277-286.

Muneer N, Abdul R, Muhammad AA. 2007. “Isolation and Characterization of Xanthomonas oryzae Pv. oryzae Isolates From North West Frontier Province (Nwfp) Pakistan.” Sarhad Journal of Agriculture 23(3), 743-51.

Musyimi DM, Chemisto KJ, Buyela DK. 2012. Growth and Physiological Response of African nightshades (Solanum Scabrum Mill.) to Sodium Chloride Salinity Stress, Global Advanced Research Journal of Food Science and Technology 1(4), 066-073.

Obradovic A, Mavridis A, Rudolph K, Janse JD, Arsenijevic M, Jones JB, Minsavage GV, Wang J. 2004. Characterization and PCR-Based Typing of Xanthomonas campestris pv. Vesicatoria From Peppers And Tomatoes In Serbia. European Journal of Plant Pathology 110, 285.

Onyango CM, Edward GO, Richard NO, Nyamongo D, Jean RG. 2016. Status and Production Practices of Vegetable African Nightshade ( Solanum Nigrum L .) in Selected Communities of Kenya. American Journal of Experimental Agriculture 13(3), 1-12.

Onyango MOA, Onyango JC, Jama B. 1999. Traditional crops in Western Kenya. In Adaptive Technologies for increased Production, Volume 3, IRPS. Maseno University, Kenya 14-23.

Opara EU, Obani FT. 2010. Performance of Some Plant Extracts In The Control Of Bacterial Spot Disease of Solanum, Agricultural journal 5(2), 45-49.

Opara EU, Odiopo FJC. 2009. Studies and Characterization of Bacterial Spot Pathogen of Tomato Xanthomonasa campestris pv vesicatoria. Journal of Molecular Genetics 1(2-4), 35-43.

Rafi A, Abdul H, Muhammad AA, Farhatullah KS, Muhammad S, Muhammad F. 2013. Identification and Characterization of Xanthomonas oryzae Pv oryzae in North-West of Pakistan. Sarhad Journal of Agriculture 29(293), 423-32.

Shenge KC, Robert BM, Carmen NM, Kerstin W. 2014. Resistance of Xanthomomnas campestris pv. vesicatoria Isolates from Tanzania to Copper and Implications for Bacterial Spot Management. African Journal of Microbiology Research 8(30), 2881-85.

Wanjekeche E, Powon P, Mwangi T, Mac Osore Z, Wekesa J. 2003. Effect of Inorganic Fertilizers and Farm Yard Manure on Mineral Composition and Taste of Solanum nigrum In G.Mureithi et al. (Eds), The Proceedings of the 18th Conference and end of Millennium Celebrations, 4-8December 2000, Mombasa, Kenya. Soil Science Society of East Africa 208-393.

White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics. In: PCR Protocols: A Guide to Methods and Applications. Academic Press, New York, USA 315-322.