Evaluation of genetic relationships of some Iranian asian pears (Pyrus pyrifolia) using SSR markers
Paper Details
Evaluation of genetic relationships of some Iranian asian pears (Pyrus pyrifolia) using SSR markers
Abstract
New several genotypes are found in the forests of the eastern Guilan province that are morphologically more like the Asian pears and have also some agronomical important traits such as very large, high quality of fresh fruits, and relative resistant to fire blight disease. In the present study, eleven microsatellite markers were used to assess the genetic relationships between these Iranian genotypes Asian pears. The UPGMA cluster analysis located the 20 genotypes into two main groups. The first main group had two subgroups including seven native genotypes and commercial Asian pears. The second group also had two subgroups involving the interspecific hybrids of Asian and European pears, and Bartlett pear. We were found a major population of the Asian pears that were grown in the northern forests of Iran and it seems that these forest are secondary centre of origin of Asian pear.
Arzani K. 2004. Progress in the national Asian pear project: A study on the adaptation of some Asian pear (Pyrus serotina Rehd) cultivars to Iranian environmental conditions. Acta Horticulturae 671, 209-212.
Assadi M, Maassoumi AAR, Khatamsaz M, Mozaffarian V. 1989. Flora of Iran. Ministry of Agriculture, Islamic Republic of Iran.
Bao L, Chen K, Zhang D, Cao Y, Yamamoto T, Teng Y. 2007. Genetic diversity and similarity of pear (Pyrus L.) cultivars native to East Asia revealed by SSR (simple sequence repeat) markers. Genetic Resources and Crop Evolution 54, 959-971.
Bassil NV, Postman JD, Neou C. 2004. Pyrus microsatellite markers from GenBank sequences. Acta Horticulturae 671, 289-292.
Bell RL. 1990. Pears (Pyrus). In: J.N. Moore & J.R. Ballington Jr. (Eds.), Genetic Resources of Temperate Fruit and Nut Crops I, pp. 655–697. International Society for Horticultural Science, Wageningen, the Netherlands.
Bell RL, Quamme HA, Layne REC, Skirvin RM. 1996. Pears. In: J Janick & J N Moore (Eds.), Fruit Breeding, Volume I: Tree and Tropical Fruits, pp. 441– 514. John Wiley & Sons,Inc.
Brini W, Mars M, Hormaza JI. 2008. Genetic diversity in local Tunisian pears (Pyrus communis L.) studied with SSR markers. Scientia Horticulturae, 115, 337-341.
Creste S, Neto AT, Figueira A. 2001. Detection of single sequence repeat polymorphisms in denaturing polyacrylamide sequencing gels by silver staining. Plant Molecular Biology Reporter 19, 299-306.
Dellaporta SL, Wood J, Hicks JB. 1983. A plant DNA minipreparation: version II. Plant Molecular Biology Reporter 1, 19-21.
Erfani J, Ebadi A, Abdollahi H, Fatahi R. 2012. Genetic diversity of some pear cultivars and genotypes using simple sequence repeat (SSR) markers. Plant Molecular Biology Reporter 30, 1065-1072.
FAO. 2012. Agricultural Statistics of the Food and Agriculture Organization of the United Nations, Rome.www.FAO.org. Accessed March 25 2013.
Ghosh AK, Lukens LN, Hunter DM, Strommer JN. 2006. European and Asian Pears: Simple Sequence Repeat–Polyacrylamide gel electrophoresis-based analysis of commercially important North American cultivars. HortScience 41, 304-309.
Inoue E, Matsuki Y, Anzai H, Evans K. 2007. Isolation and characterization of microsatellite markers in Japanese pear (Pyrus pyrifolia Nakai). Molecular Ecology 7, 445-447.
Janick J, Paull RE. 2008. The encyclopedia of fruits and nuts. CABI.
Kim CS, Lee CH, Park KW, Kang SJ, Shin IS, Lee GP. 2005. Phylogenetic relationships among Pyrus pyrifolia and P. communis detected by randomly amplified polymorphic DNA (RAPD) and conserved rDNA sequences. Scientia Horticulturae, 106, 491-501.
Kimura T, Sawamura Y, Kotobuki K, Matsuta N, Hayashi T, Ban Y, Yamamoto T. 2003. Parentage analysis in pear [Pyrus] cultivars characterized by SSR markers. Journal of the Japanese Society for Horticultural Science 72, 182-189.
Kimura T, Shi YZ, Shoda M, Kotobuki K, Matsuta N, Hayashi T, Ban Y, Yamamoto T. 2002. Identification of Asian pear varieties by SSR analysis. Breeding. Sci. 52, 115-121.
Krichen L, Mnejja M, Arús P, Marrakchi M, Trifi-Farah N. 2006. Use of microsatellite polymorphisms to develop an identification key for Tunisian apricots. Genetic Resources and Crop Evolution 53, 1699-1706.
Layne REC, Qamme HA. 1975. Pears. In: Janick J, Moore JN (Eds.), Advances in Fruit Breeding. Purdue University Press, West Lafayette Indiana. pp 38–70. USA.
Liebhard R, Gianfranceschi L, Koller B, Ryder CD, Tarchini R, Van de Weg E, Gessler C. 2002. Development and characterisation of 140 new microsatellites in apple (Malus x domestica Borkh.). Molecular Breeding, 10, 217-241.
Nei M. 1972. Genetic distance between populations. Amer Natur, 283-292.
Norelli JL, Jones AL, Aldwinckle HS. 2003. Fire blight management in the twenty-first century: using new technologies that enhance host resistance in apple. Plant Disease 87, 756-765.
Rohlf FJ. 1992. NTSYS-pc: numerical taxonomy and multivariate analysis system. Applied Biostatistics. Exeter Software, Setauket, N.Y.
Sawamura Y, Saito T, Takada N, Yamamoto T, Kimura T, Hayashi T, Kotobuki K. 2004. Identification of parentage of Japanese pear ‘Housui’. Journal of the Japanese Society for Horticultural Science 73, 511-518.
Wünsch A, Hormaza JI. 2002. Cultivar identification and genetic fingerprinting of temperate fruit tree species using DNA markers. Euphytica 125, 59-67.
Wünsch A, Hormaza JI. 2007. Characterization of variability and genetic similarity of European pear using microsatellite loci developed in apple. Scientia Horticulturae 113, 37-43.
Yamamoto T, Kimura T, Sawamura Y, Kotobuki K, Ban Y, Hayashi T, Matsuta N. 2001. SSRs isolated from apple can identify polymorphism and genetic diversity in pear. Theorical and Applied Genetic 102, 865-870.
Yamamoto T, Kimura T, Sawamura Y, Manabe T, Kotobuki K, Hayashi T, Ban Y, Matsuta N. 2002a. Simple sequence repeats for genetic analysis in pear. Euphytica. 124, 129-137.
Yamamoto T, Kimura T, Shoda M, Ban Y, Hayashi T, Matsuta N. 2002b. Development of microsatellite markers in the Japanese pear (Pyrus pyrifolia Nakai). Molecular Ecology 2, 14-16.
Yamamoto T, Kimura T, Shoda M, Imai T, Saito T, Sawamura Y, Kotobuki K, Hayashi T, Matsuta N. 2002c. Genetic linkage maps constructed by using an interspecific cross between Japanese and European pears. Theorical and Applied Genetic 106, 9-18.
Yamamoto T, Kimura T, Soejima J, Sanada T, Ban Y, Hayashi T. 2004. Identification of quince varieties using SSR markers developed from pear and apple. Breeding Sciences 54, 239-244.
Zamani A, Atar F, Ghahraman A, Maroufi H. 2008. Anatomical studies of the genus Pyrus L.(Rosaceae) in Iran and its taxonomical implications. The Iranian journal of botany 14, 132-142.
Zhang Q, Li J, Zhao Y, Korban SS, Han Y. 2012. Evaluation of genetic diversity in Chinese wild apple species along with apple cultivars using SSR markers. Plant Molecular Biology Reporter 30, 539-546.
Fariborz Zaree, Rana Mozedi (2015), Evaluation of genetic relationships of some Iranian asian pears (Pyrus pyrifolia) using SSR markers; JBES, V6, N6, June, P258-267
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