Genetic diversity in the mitochondrial DNA of the Iranian commomnatvie and exotic chicken breeds

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Research Paper 01/07/2015
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Genetic diversity in the mitochondrial DNA of the Iranian commomnatvie and exotic chicken breeds

R. Basiri, J. Pishjang, A. Ghorbani
J. Bio. Env. Sci.7( 1), 537-542, July 2015.
Certificate: JBES 2015 [Generate Certificate]

Abstract

Genetic diversity which exists among animals has been created as a result of evolution process during so many years and considering different problems such as economic conditions and the time duration of performance of this program, first, genetic potential and similarities existing among different races should be examined. According to sensible characteristics of the native breeds of the animals existing in Iran and in order to maintain and save original and native animals, researches should be carried out. One of the indicators in determining genetic diversity in animals is the area of controlling of the gene of the mitochondrion. And in this research, using this indicator, the similarities and differences between native common chickens of Iran and some foreign exotic breeds of broiler and layer breeds of chickens determine and the genetic diversity among them estimated. In this research a number of 20 native common chickens were used among which there were 17 different specific haplotype with haplotype 13th including four samples of mentioned chickens. Achieved haplotype 13th with three sub-category of Jungle red chickens, two types of White Leghorn chickens, one type of New Hampshire red chickens and three different types of Asian-breed chickens (Tibetan, Silky, Laos) totally showed difference in80 gene place. The results of sequence analysis, the heliotype and nucleotide diversity were calculated 1and 0.163 respectively. Considering the phylogenetic graph among the created haplotypes.

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Akın O. 2002. Evcil Hayvan Genetik Kaynakları Koruma Projesi; Proğram Değerlendirme Toplantısı. T.C. Tarım ve Köy işleri Bakanlığı, Tarımsal Araştırmalar Genel Müdürlüğü, Hayvancılık ve Su Ürünleri Araştırmaları Daire Başkanlığı Ankara.

Bao HG, Zhao CJ, Li JY, Wu CX. 2008. Sequencing and alignment of mitochondrial genomesof Tibetian chicken and two lowland chicken breeds. Sci China Ser C-Life Sci, Jan 51(1), 47-51.

Berkman CC. 2001. Ras1, Rag1, Rag 3’ and IGF2 RFLP Analysis of Some Hatchery Rainbow Trout (Oncorhynchusmykiss) Populations in Turkey. A Thesis Submitted to Graduade School Natural and Applied Sciences of Middle East Technical University Ankara.

Chen XJ, Butow RA. 2005. The organization and inheritance of the mitochondrial genome. Nature Reviews.

Chinnery PF, Schon EA. 2003. Mitochondria. J. Neurol Neurosurg Psychiatry 2003 74, 1188-1199.

Desjardins P, Morais R. 1990. Sequnce and gene organization of the chicken mitochondrial genome: A novel gene order in high vertebrates. J. Mol. Biol 212, 599-634.

Ertuğrul, M, Akman N, Dellal G, Goncagül T. 2000. Hayvan Gen Kaynaklarının Korunma sıve Türkiye Hayvan Gen Kaynakları. Türkiye Ziraat Mühendisliği V. Teknik Kongresi, 1. Cilt, s. 285-300, Yayın no. 38, Ankara.

Guan X, Geng T, Silva P, Smith EJ. 2007. Mitochondrial DNA sequence and haplotype variation analysis in the chicken (Gallus gallus). Journal of Heredity, November 5, 2007.

Mohammadipestebik F, Pirany N, Shojaa J, Mohammadhashemi A. 2011. Determination the Mtdna d-loop sequence in Marandi native chicken population and its phylogenic relationships with other breeds. Journal of Animal Science Researches 21 (2), 1-9.

Pirany N, Mohammadhashemi A, Alijani S, Rezazadeh Goli R, Ghanbari S. 2009. Molecular analysis of Mazandrani native chicken population based on HVR-I region of Mitochondrial DNA.Jounal of Agricultural Biotechnology 1(2).

Sorenson MD, Ast JC, Dimcheff DE, Yuri T, Mindell DP. 1999. Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates. Molecular Phylogenetics and Evolution 12(2), 105–114.

Wenink PW, Baker AJ, Tilanus MGJ. 1994. Mitochondrial control region sequences in two shorebird species, the Turnstone and the Dunlin, and their utility in their population genetic studies. Mol. Bid. Evol II (1), 22-31.